About

Faculty Rank

  • Assistant Professor

Research

Research Focus

High throughput sequencing data analysis, bioinformatics, and computational biology.

Programs

Molecular and Cellular Oncology

College & Department

Contact Information

235 JF Hardymon Building
331 Rose Street, University of Kentucky
Lexington, KY 40506
United States

Phone
859-257-3101
Email
jinze.liu@uky.edu

Publications

  1. Comprehensive genomic characterization of squamous cell lung cancers.
    Cancer Genome Atlas Research Network. Nature 489(7417):519-25, 2012. Erratum in: Nature 491(7423):288, 2012.
  2. DiffSplice: the genome-wide detection of differential splicing events with RNA-seq.
    Hu Y, Huang Y, Du Y, Orellana CF, Singh D, Johnson AR, Monroy A, Kuan PF, Hammond SM, Makowski L, Randell SH, Chiang DY, Hayes DN, Jones C, Liu Y, Prins JF, Liu J. Nucleic Acids Res 41(2):e39, 2013.
  3. A robust method for transcript quantification with RNA-seq data.
    Huang Y, Hu Y, Jones CD, MacLeod JN, Chiang DY, Liu Y, Prins JF, Liu J. J Comput Biol 20(3):167-87, 2013.
  4. A Probabilistic Framework for Aligning Paired-end RNA-seq Data.
    Hu Y, Wang K, He X, Chiang DY, Prins JF, Liu J. Bioinformatics 26:1950-1957, 2010.
  5. MapSplice: Mapping RNA-seq Reads for Splice Junction Discovery.
    Wang K, Singh D, Zeng Z, Huang Y, Coleman S, He X, Perou C, MacLeod JN, Chiang DY, Prins JF, Liu J. Nucleic Acids Research Methods Online 38(18):1-14, 2010.